Soil and water samples were analysed for trace metals and As in two watercourses and 14 sampling plots in a salt marsh polluted by mine wastes in SE Spain. Groundwater levels, soil pH and Eh were measured ‘in situ’ for a 12-month period in each sampling plot, and total calcium carbonate was also determined. Low concentrations of soluble metals (maximum Mn 1.089 mg L−1 and maximum Zn 0.553 mg L−1) were found in the watercourses. However, total metal contents were extremely high in the soils of a zone of the salt marsh (maximum 1,933 mg kg−1 of Mn, 62,280 mg kg−1 of Zn, 16,845 mg kg−1 of Pb, 77 mg kg−1 of Cd, 418 mg kg−1 of Cu and 725 mg kg−1 of As), and soluble metals in the pore water reached 38.7 mg L−1 for Zn, 3.15 mg L−1 for Pb, 48.0 mg L−1 for Mn, 0.61 mg L−1 for Cd and 0.29 mg L−1 for As. Variable concen trations with depth indicate a possible re-mobilisation of the metals, which could be related to spatial and temporal variations of water table level, pH and Eh and to the presence of calcium carbonate. A tendency for the Eh to decrease in the warmest months and to increase in the coldest ones was found, especially, in plots that received water with a high content of dissolved organic carbon. Hence, the existence of nutrient effluent-enriched water may modify the physical–chemical conditions of the soil–water sys tem and influence metal mobility.